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1.
Gut and Liver ; : 139-140, 2015.
Article in English | WPRIM | ID: wpr-136405

ABSTRACT

No abstract available.


Subject(s)
Female , Humans , Male , Colorectal Neoplasms/genetics , CpG Islands/physiology , DNA Methylation , Phenotype
2.
Gut and Liver ; : 139-140, 2015.
Article in English | WPRIM | ID: wpr-136404

ABSTRACT

No abstract available.


Subject(s)
Female , Humans , Male , Colorectal Neoplasms/genetics , CpG Islands/physiology , DNA Methylation , Phenotype
3.
Gut and Liver ; : 202-207, 2015.
Article in English | WPRIM | ID: wpr-136385

ABSTRACT

BACKGROUND/AIMS: CpG island methylator phenotype (CIMP)- high colorectal cancers (CRCs) have distinct clinicopathological features from their CIMP-low/negative CRC counterparts. However, controversy exists regarding the prognosis of CRC according to the CIMP status. Therefore, this study examined the prognosis of Korean patients with colon cancer according to the CIMP status. METHODS: Among a previous cohort population with CRC, a total of 154 patients with colon cancer who had available tissue for DNA extraction were included in the study. CIMP-high was defined as 3/5 methylated markers using the five-marker panel (CACNA1G, IGF2, NEUROG1, RUNX3, and SOCS1). RESULTS: CIMP-high and CIMP-low/negative cancers were observed in 27 patients (17.5%) and 127 patients (82.5%), respectively. Multivariate analysis adjusting for age, gender, tumor location, tumor stage and CIMP and microsatellite instability (MSI) statuses indicated that CIMP-high colon cancers were associated with a significant increase in colon cancer-specific mortality (hazard ratio [HR], 3.23; 95% confidence interval [CI], 1.20 to 8.69; p=0.02). In microsatellite stable cancers, CIMP-high cancer had a poor survival outcome compared to CIMP-low/negative cancer (HR, 2.91; 95% CI, 1.02 to 8.27; p=0.04). CONCLUSIONS: Regardless of the MSI status, CIMP-high cancers had poor survival outcomes in Korean patients.


Subject(s)
Adult , Aged , Female , Humans , Male , Middle Aged , Age Factors , Colorectal Neoplasms/genetics , CpG Islands/physiology , DNA Methylation , Microsatellite Instability , Multivariate Analysis , Neoplasm Staging , Phenotype , Prognosis , Republic of Korea , Sex Factors , Survival Analysis
4.
Gut and Liver ; : 202-207, 2015.
Article in English | WPRIM | ID: wpr-136384

ABSTRACT

BACKGROUND/AIMS: CpG island methylator phenotype (CIMP)- high colorectal cancers (CRCs) have distinct clinicopathological features from their CIMP-low/negative CRC counterparts. However, controversy exists regarding the prognosis of CRC according to the CIMP status. Therefore, this study examined the prognosis of Korean patients with colon cancer according to the CIMP status. METHODS: Among a previous cohort population with CRC, a total of 154 patients with colon cancer who had available tissue for DNA extraction were included in the study. CIMP-high was defined as 3/5 methylated markers using the five-marker panel (CACNA1G, IGF2, NEUROG1, RUNX3, and SOCS1). RESULTS: CIMP-high and CIMP-low/negative cancers were observed in 27 patients (17.5%) and 127 patients (82.5%), respectively. Multivariate analysis adjusting for age, gender, tumor location, tumor stage and CIMP and microsatellite instability (MSI) statuses indicated that CIMP-high colon cancers were associated with a significant increase in colon cancer-specific mortality (hazard ratio [HR], 3.23; 95% confidence interval [CI], 1.20 to 8.69; p=0.02). In microsatellite stable cancers, CIMP-high cancer had a poor survival outcome compared to CIMP-low/negative cancer (HR, 2.91; 95% CI, 1.02 to 8.27; p=0.04). CONCLUSIONS: Regardless of the MSI status, CIMP-high cancers had poor survival outcomes in Korean patients.


Subject(s)
Adult , Aged , Female , Humans , Male , Middle Aged , Age Factors , Colorectal Neoplasms/genetics , CpG Islands/physiology , DNA Methylation , Microsatellite Instability , Multivariate Analysis , Neoplasm Staging , Phenotype , Prognosis , Republic of Korea , Sex Factors , Survival Analysis
5.
Article in English | IMSEAR | ID: sea-37377

ABSTRACT

Evidence now suggests that epigenetic abnormalities, particularly altered DNA methylation, play a crucial role in the development and progression of human gastrointestinal malignancies. Two distinct DNA methylation abnormalities are observed together in cancer. One is an overall genome-wide reduction in DNA methylation (global hypomethylation) and the other is regional hypermethylation within the CpG islands of specific gene promoters. Global hypomethylation is believed to induce proto-oncogene activation and chromosomal instability, whereas regional hypermethylation is strongly associated with transcriptional silencing of tumor suppressor genes. To date, genes involved in regulation of the cell cycle, DNA repair, growth signaling, angiogenesis, and apoptosis, are all known to be inactivated by hypermethylation. Recently developed techniques for detecting changes in DNA methylation have dramatically enhanced our understanding of the patterns of methylation that occur as cancers progress. One of the key contributors to aberrant methylation is aging, but other patterns of methylation are cancer-specific and detected only in a subset of tumors exhibiting the CpG island methylator phenotype (CIMP). Although the cause of altered patterns of DNA methylation in cancer remains unknown, it is believed that epidemiological factors, notably dietary folate intake, might strongly influence DNA methylation patterns. Recent studies further suggest that polymorphisms of genes involved in folate metabolism are causally related to the development of cancer. Identifying epidemiological factors responsible for epigenetic changes should provide clues for cancer prevention in the future.


Subject(s)
Aging/physiology , CpG Islands/physiology , DNA Methylation , Epigenesis, Genetic/physiology , Folic Acid/physiology , Gastrointestinal Neoplasms/genetics , Gene Silencing/physiology , Genetic Predisposition to Disease , Humans , Inflammation/physiopathology
6.
Journal of Korean Medical Science ; : 555-559, 2000.
Article in English | WPRIM | ID: wpr-150734

ABSTRACT

Recent evidence shows that transcriptional silencing as a consequence of hypermethylation of CpG islands is an important mechanism in the inactivation of p16INK4 tumor suppressor gene. This study is designed to clarify the significance of p16INK4 hypermethylation in 23 cases of glioblastomas (GBMs) by methylation-specific polymerase chain reaction (PCR) and p16 immunostaining. Fourteen cases (60.9%) out of 23 GBMs revealed hypermethylation on p16. p16 immunostaining revealed that 13 (93%) of these 14 hypermethylation cases showed complete loss of immunoreactivity and only one (7%) case retained immunoreactivity. Among 9 methylation-negative cases, 4 were immunonegative, which might be related to mutations or deletions other than hypermethylation. The most significant finding was that of 17 cases with immunonegativity, 13 cases (76.5%) showed hypermethylation. We reconfirmed that p16 hypermethylation may be one of the major mechanisms of tumorigenesis of GBMs and the results between the methylation specific-PCR study and p16 immunostaining had a good correlation.


Subject(s)
Adult , Female , Humans , Male , 5' Untranslated Regions/metabolism , 5' Untranslated Regions/genetics , Antisense Elements (Genetics) , Brain Neoplasms/pathology , Brain Neoplasms/genetics , Brain Neoplasms/chemistry , CpG Islands/physiology , DNA Methylation , Gene Silencing/physiology , Glioblastoma/pathology , Glioblastoma/genetics , Glioblastoma/chemistry , Middle Aged , Polymerase Chain Reaction , Cyclin-Dependent Kinase Inhibitor p16/genetics , Cyclin-Dependent Kinase Inhibitor p16/analysis
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